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Santorini to Malta International Airport flight

Explore the cheapest one-way and round-trip flights from Santorini to Malta International Airport over the next 90 days, with one-way fares from €60 and round-trip from €238. Based on Trip.com's latest 7-day flight data.

      • JTR 06:00
        4h 5m
        1 stop
        MLA 09:05
        Santorini - Malta | Wed, Nov 4 | AEGEAN
        MLA 09:55
        11h 20m
        1 stop
        JTR 22:15
        Malta - Santorini | Sun, Nov 8 | AEGEAN
        €238 €573
        57% off
        57% off
        €573 €238
      • JTR 19:00
        25h 55m
        1 stop
        MLA 19:55
        Santorini - Malta | Fri, Oct 16 | Swiss Airlines
        MLA 13:35
        27h 35m
        1 stop
        JTR 18:10
        Malta - Santorini | Thu, Oct 22 | Swiss Airlines
        €244 €573
        56% off
        56% off
        €573 €244
      • JTR 08:25
        12h 30m
        1 stop
        MLA 19:55
        Santorini - Malta | Thu, Oct 15 | AEGEAN
        MLA 20:55
        13h 55m
        1 stop
        JTR 11:50
        Malta - Santorini | Thu, Oct 22 | AEGEAN
        €268 €573
        53% off
        53% off
        €573 €268
      • JTR 15:05
        6h
        1 stop
        MLA 20:05
        Santorini - Malta | Thu, Oct 22 | AEGEAN
        MLA 09:55
        11h 20m
        1 stop
        JTR 22:15
        Malta - Santorini | Sun, Oct 25 | AEGEAN
        €273
        52% off
        €573 €273
      • JTR 19:25
        27h 40m
        1 stop
        MLA 22:05
        Santorini - Malta | Fri, Oct 16 | Lufthansa
        MLA 14:20
        26h 50m
        1 stop
        JTR 18:10
        Malta - Santorini | Thu, Oct 22 | Swiss Airlines
        €279
        51% off
        €573 €279
      • JTR 19:00
        14h 50m
        1 stop
        MLA 08:50
        Santorini - Malta | Fri, Oct 9 | Swiss Airlines
        MLA 06:05
        9h 50m
        1 stop
        JTR 16:55
        Malta - Santorini | Thu, Oct 15 | Lufthansa
        €284
        50% off
        €573 €284
      • JTR 20:45
        23h 20m
        1 stop
        MLA 19:05
        Santorini - Malta | Mon, Oct 12 | Swiss Airlines
        MLA 05:55
        10h
        1 stop
        JTR 16:55
        Malta - Santorini | Sun, Oct 18 | Lufthansa
        €291
        49% off
        €573 €291
      • JTR 16:35
        4h 30m
        1 stop
        MLA 20:05
        Santorini - Malta | Mon, Oct 12 | AEGEAN
        MLA 20:55
        9h 50m
        1 stop
        JTR 07:45
        Malta - Santorini | Mon, Oct 19 | AEGEAN
        €296
        48% off
        €573 €296
      • JTR 14:20
        9h 45m
        1 stop
        MLA 23:05
        Santorini - Malta | Mon, Oct 12 | Lufthansa
        MLA 13:15
        5h 55m
        1 stop
        JTR 20:10
        Malta - Santorini | Sun, Oct 18 | Swiss Airlines
        €306
        47% off
        €573 €306
      • JTR 19:25
        27h 40m
        1 stop
        MLA 22:05
        Santorini - Malta | Fri, Oct 9 | Lufthansa
        MLA 06:05
        9h 50m
        1 stop
        JTR 16:55
        Malta - Santorini | Thu, Oct 15 | Lufthansa
        €332
        42% off
        €573 €332
      • JTR 19:10
        19h 10m
        1 stop
        MLA 13:20
        Santorini - Malta | Wed, Oct 21 | Lufthansa
        MLA 07:15
        10h 30m
        1 stop
        JTR 18:45
        Malta - Santorini | Sat, Oct 24 | Lufthansa
        €351
        39% off
        €573 €351
      • JTR 17:45
        19h 25m
        1 stop
        MLA 12:10
        Santorini - Malta | Thu, Oct 8 | Lufthansa
        MLA 06:05
        9h 50m
        1 stop
        JTR 16:55
        Malta - Santorini | Thu, Oct 15 | Lufthansa
        €418
        27% off
        €573 €418
      • JTR 13:00
        17h 25m
        1 stop
        MLA 14:00
        Santorini - Malta | Fri, Oct 9 | Normal Airline
        MLA 15:00
        6h
        Direct
        JTR 16:00
        Malta - Santorini | Sun, Oct 11 | Normal Airline
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        Find more flights
      • JTR 23:50
        16h 45m
        1 stop
        MLA 15:35
        Santorini - Malta | Tue, Oct 27 | Ryanair
        €60 €132
        55% off
        55% off
        €132 €60
      • JTR 23:50
        14h 55m
        1 stop
        MLA 13:45
        Santorini - Malta | Tue, Nov 3 | Ryanair
        €62 €132
        53% off
        53% off
        €132 €62
      • JTR 19:10
        6h 10m
        1 stop
        MLA 00:20
        Santorini - Malta | Mon, Oct 26 | Ryanair
        €72 €132
        45% off
        45% off
        €132 €72
      • JTR 23:50
        17h 20m
        1 stop
        MLA 16:10
        Santorini - Malta | Sun, Oct 18 | Ryanair
        €75
        43% off
        €132 €75
      • JTR 23:30
        15h 15m
        1 stop
        MLA 13:45
        Santorini - Malta | Mon, Oct 19 | Ryanair
        €80
        39% off
        €132 €80
      • JTR 19:55
        15h 10m
        1 stop
        MLA 10:05
        Santorini - Malta | Sat, Oct 31 | Ryanair
        €90
        32% off
        €132 €90
      • JTR 18:15
        7h 5m
        1 stop
        MLA 00:20
        Santorini - Malta | Mon, Oct 19 | SKY express
        €90
        32% off
        €132 €90
      • JTR 17:55
        7h 25m
        1 stop
        MLA 00:20
        Santorini - Malta | Mon, Oct 26 | SKY express
        €91
        31% off
        €132 €91
      • JTR 23:30
        15h 15m
        1 stop
        MLA 13:45
        Santorini - Malta | Mon, Oct 12 | Ryanair
        €91
        31% off
        €132 €91
      • JTR 18:15
        16h 50m
        1 stop
        MLA 10:05
        Santorini - Malta | Sat, Oct 31 | SKY express
        €95
        28% off
        €132 €95
      • JTR 06:00
        5h 10m
        1 stop
        MLA 10:10
        Santorini - Malta | Tue, Nov 17 | AEGEAN
        €95
        28% off
        €132 €95
      • JTR 22:00
        13h 5m
        1 stop
        MLA 10:05
        Santorini - Malta | Sat, Oct 31 | AEGEAN
        €96
        27% off
        €132 €96
      • JTR 13:00
        17h 25m
        1 stop
        MLA 14:00
        Santorini - Malta | Fri, Oct 9 | Normal Airline
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        Find more flights

Displayed flight fares from Santorini to Malta International Airport are based on average prices across airlines for the next 3 months according to the latest Trip.com data.

Which airlines are the most popular for Santorini to Malta International Airport flights?

Ryanair logo Ryanair

Flight Schedule from Santorini to Malta International Airport

Flight info.
Departure
Arrival
Weekly Schedule

  1. GQ351

    Santorini Airport

    15:55

    JTR

    55m

    Direct

    16:50

    ATH

    S M T W T F S
    Search

  2. FR6028

    Athens International Airport "Eleftherios Venizelos"

    09:00

    ATH

    1h 50m

    Direct

    09:50

    MLA

    S M T - T F S

  3. A3351

    Santorini Airport

    06:00

    JTR

    45m

    Direct

    06:45

    ATH

    S M T W T F S
    Search

  4. FR6028

    Athens International Airport "Eleftherios Venizelos"

    09:00

    ATH

    1h 50m

    Direct

    09:50

    MLA

    S M T - T F S

  5. A3369

    Santorini Airport

    16:35

    JTR

    45m

    Direct

    17:20

    ATH

    S M T W T F S
    Search

  6. FR6043

    Athens International Airport "Eleftherios Venizelos"

    00:25

    ATH

    1h 50m

    Direct

    01:15

    MLA

    - - - W - - -

  7. A3359

    Santorini Airport

    18:40

    JTR

    50m

    Direct

    19:30

    ATH

    S M T W T F S
    Search

  8. FR6028

    Athens International Airport "Eleftherios Venizelos"

    09:00

    ATH

    1h 50m

    Direct

    09:50

    MLA

    S M T - T F S

  9. GQ351

    Santorini Airport

    15:55

    JTR

    55m

    Direct

    16:50

    ATH

    S M T W T F S
    Search

  10. FR6043

    Athens International Airport "Eleftherios Venizelos"

    00:25

    ATH

    1h 50m

    Direct

    01:15

    MLA

    - - - W - - -

  11. GQ355

    Santorini Airport

    18:15

    JTR

    55m

    Direct

    19:10

    ATH

    S M T W T F S
    Search

  12. FR6028

    Athens International Airport "Eleftherios Venizelos"

    09:00

    ATH

    1h 50m

    Direct

    09:50

    MLA

    S M T - T F S

  13. GQ353

    Santorini Airport

    17:55

    JTR

    55m

    Direct

    18:50

    ATH

    S M T W T F S
    Search

  14. FR6028

    Athens International Airport "Eleftherios Venizelos"

    09:00

    ATH

    1h 50m

    Direct

    09:50

    MLA

    S M T - T F S

  15. FR1233

    Santorini Airport

    07:20

    JTR

    50m

    Direct

    08:10

    ATH

    S M T W T F S
    Search

  16. FR6028

    Athens International Airport "Eleftherios Venizelos"

    09:00

    ATH

    1h 50m

    Direct

    09:50

    MLA

    S M T - T F S

  17. GQ347

    Santorini Airport

    14:15

    JTR

    55m

    Direct

    15:10

    ATH

    S M T W T F S
    Search

  18. A3730

    Athens International Airport "Eleftherios Venizelos"

    14:15

    ATH

    1h 40m

    Direct

    14:55

    MLA

    S - T W - - S

  19. A3361

    Santorini Airport

    09:30

    JTR

    1h

    Direct

    10:30

    ATH

    S M T W T F S
    Search

  20. FR6028

    Athens International Airport "Eleftherios Venizelos"

    09:00

    ATH

    1h 50m

    Direct

    09:50

    MLA

    S M T - T F S
Find more flights and airlines

What to know about flights from Santorini to Malta International Airport?

Cheapest one-way flight price €60
Off-season travel month September
Peak season for travel November

FAQs for Santorini to Malta International Airport Flights

  • When are flight tickets from Santorini (JTR) to Malta (MLA) the cheapest?

    Airlines adjust prices for flights from Santorini to Malta based on the date and time of your booking. By analyzing data from all airlines, on Trip.com, you can find the cheapest flight prices on Tuesdays, Wednesdays, and Saturdays.
  • According to Trip.com's data, the lowest price is around €263.
  • There are 1 airport(s) in Malta (MLA): Malta International Airport.
  • One-way flights from Santorini to Malta International Airport currently start from €60, and round-trip fares start from €238. The lowest fare is currently available on flights operated by Ryanair departing on Tue, Oct 27. Fares are subject to change based on availability.
  • Enter your Santorini and Malta International Airport, select your departure date and number of passengers, then compare flights by price, flight duration and baggage allowance. Once you've chosen a fare, review the change and cancellation policy, fill in your passenger details and pay to receive your booking confirmation.

Find Cheap Flights with Trip.com

Note: Prices shown on this page are the estimated lowest prices and include all taxes and fees found in the last 24 hours.

Book with no extra fees

Prices displayed on this page are all-inclusive (including taxes, fuel surcharges, civil aviation development fund, etc.), with all fees confirmed before payment. Fees for luggage, meals, Wi-Fi, or other additional services are also included as shown in the flight cards.

Real-time pricing updates

Prices, availability, and travel information on this page have been updated within the last 24 hours—sometimes even in real time. The more popular the route, the more accurate the data.

Change & Cancellation Policy

Trip.com shows the cancellation and change policies for each flight ticket during the booking process, including any fees and applicable conditions. Please check the following scenarios:
Voluntary cancellation/change:
To request a change or cancellation, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and flight segment, and submit your request. Please note that additional charges may apply according to the airline's ticket policy.
Cancellation/change due to a flight schedule change:
If the flight schedule has changed and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For more details about change and cancellation policies, please visit the customer support pages.