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Heraklion International Airport to Santorini Airport flight

Explore the cheapest one-way and round-trip flights from Heraklion International Airport to Santorini Airport over the next 90 days, with one-way fares from €51 and round-trip from €122. Based on Trip.com's latest 7-day flight data.

    • HER 18:50
      13h 45m
      1 stop
      JTR 08:35
      Heraklion - Santorini | Tue, Dec 1 | SKY express
      JTR 09:00
      9h 15m
      1 stop
      HER 18:15
      Santorini - Heraklion | Mon, Dec 7 | SKY express
      €122 €204
      40% off
      40% off
      €204 €122
    • HER 15:35
      2h 35m
      1 stop
      JTR 18:10
      Heraklion - Santorini | Sun, Nov 29 | SKY express
      JTR 14:55
      3h 20m
      1 stop
      HER 18:15
      Santorini - Heraklion | Mon, Dec 7 | SKY express
      €155 €204
      24% off
      24% off
      €204 €155
    • HER 08:10
      3h 5m
      1 stop
      JTR 11:15
      Heraklion - Santorini | Sat, Dec 5 | AEGEAN
      JTR 13:45
      4h 30m
      1 stop
      HER 18:15
      Santorini - Heraklion | Mon, Dec 7 | SKY express
      €157 €204
      23% off
      23% off
      €204 €157
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Sat, Dec 5 | SKY express
      JTR 13:45
      4h 30m
      1 stop
      HER 18:15
      Santorini - Heraklion | Mon, Dec 7 | SKY express
      €160
      22% off
      €204 €160
    • HER 21:50
      9h 45m
      1 stop
      JTR 07:35
      Heraklion - Santorini | Fri, Nov 6 | AEGEAN
      JTR 08:10
      2h 40m
      1 stop
      HER 10:50
      Santorini - Heraklion | Sun, Nov 8 | AEGEAN
      €164
      20% off
      €204 €164
    • HER 15:40
      5h 30m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Thu, Nov 19 | SKY express
      JTR 13:15
      7h 50m
      1 stop
      HER 21:05
      Santorini - Heraklion | Sat, Nov 21 | SKY express
      €165
      19% off
      €204 €165
    • HER 21:50
      9h 45m
      1 stop
      JTR 07:35
      Heraklion - Santorini | Thu, Nov 5 | AEGEAN
      JTR 08:10
      2h 40m
      1 stop
      HER 10:50
      Santorini - Heraklion | Sun, Nov 8 | AEGEAN
      €166
      19% off
      €204 €166
    • HER 08:10
      3h 5m
      1 stop
      JTR 11:15
      Heraklion - Santorini | Thu, Dec 3 | AEGEAN
      JTR 13:45
      4h 30m
      1 stop
      HER 18:15
      Santorini - Heraklion | Mon, Dec 7 | SKY express
      €168
      18% off
      €204 €168
    • HER 18:25
      3h 50m
      1 stop
      JTR 22:15
      Heraklion - Santorini | Sat, Nov 7 | AEGEAN
      JTR 08:10
      2h 40m
      1 stop
      HER 10:50
      Santorini - Heraklion | Sun, Nov 8 | AEGEAN
      €169
      17% off
      €204 €169
    • HER 13:00
      17h 25m
      1 stop
      JTR 14:00
      Heraklion - Santorini | Wed, Oct 28 | Normal Airline
      JTR 15:00
      6h
      Direct
      HER 16:00
      Santorini - Heraklion | Fri, Oct 30 | Normal Airline
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    • Cheapest
      HER 23:30
      9h 40m
      1 stop
      JTR 09:10
      Heraklion - Santorini | Wed, Nov 4 | AEGEAN
      €51 €93
      45% off
      45% off
      €93 €51
    • HER 21:55
      25h
      1 stop
      JTR 22:55
      Heraklion - Santorini | Thu, Nov 5 | AEGEAN
      €54 €93
      42% off
      42% off
      €93 €54
    • HER 06:40
      11h 45m
      1 stop
      JTR 18:25
      Heraklion - Santorini | Fri, Nov 6 | SKY express
      €58 €93
      38% off
      38% off
      €93 €58
    • HER 22:25
      24h 50m
      1 stop
      JTR 23:15
      Heraklion - Santorini | Sat, Oct 31 | SKY express
      €59
      37% off
      €93 €59
    • HER 22:45
      24h
      1 stop
      JTR 22:45
      Heraklion - Santorini | Tue, Nov 3 | SKY express
      €62
      33% off
      €93 €62
    • HER 18:50
      13h 45m
      1 stop
      JTR 08:35
      Heraklion - Santorini | Wed, Dec 16 | SKY express
      €63
      32% off
      €93 €63
    • HER 23:30
      8h 15m
      1 stop
      JTR 07:45
      Heraklion - Santorini | Sun, Nov 1 | SKY express
      €63
      32% off
      €93 €63
    • HER 22:25
      9h 30m
      1 stop
      JTR 07:55
      Heraklion - Santorini | Wed, Oct 28 | SKY express
      €63
      32% off
      €93 €63
    • HER 22:25
      24h 30m
      1 stop
      JTR 22:55
      Heraklion - Santorini | Thu, Nov 5 | SKY express
      €64
      31% off
      €93 €64
    • HER 13:00
      17h 25m
      1 stop
      JTR 14:00
      Heraklion - Santorini | Wed, Oct 28 | Normal Airline
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    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Wed, Dec 2 | SKY express
      €80 €154
      48% off
      48% off
      €154 €80
    • HER 11:30
      2h 45m
      1 stop
      JTR 14:15
      Heraklion - Santorini | Sun, Nov 22 | AEGEAN
      €83 €154
      46% off
      46% off
      €154 €83
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Tue, Nov 24 | SKY express
      €84 €154
      45% off
      45% off
      €154 €84
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Thu, Dec 10 | SKY express
      €89
      42% off
      €154 €89
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Tue, Dec 15 | SKY express
      €89
      42% off
      €154 €89
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Thu, Jan 7 | SKY express
      €90
      42% off
      €154 €90
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Fri, Nov 6 | SKY express
      €91
      41% off
      €154 €91
    • HER 15:40
      2h 30m
      1 stop
      JTR 18:10
      Heraklion - Santorini | Fri, Nov 27 | SKY express
      €92
      40% off
      €154 €92
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Mon, Nov 30 | SKY express
      €92
      40% off
      €154 €92
    • HER 13:00
      17h 25m
      1 stop
      JTR 14:00
      Heraklion - Santorini | Wed, Oct 28 | Normal Airline
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    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Fri, Oct 30 | SKY express
      €105 €206
      49% off
      49% off
      €206 €105
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Mon, Nov 2 | SKY express
      €173 €206
      16% off
      16% off
      €206 €173
    • HER 13:00
      17h 25m
      1 stop
      JTR 14:00
      Heraklion - Santorini | Wed, Oct 28 | Normal Airline
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    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Wed, Dec 23 | SKY express
      €78 €93
      16% off
      16% off
      €93 €78
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Wed, Dec 2 | SKY express
      €80 €316
      75% off
      75% off
      €316 €80
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Thu, Nov 5 | SKY express
      €91 €316
      71% off
      71% off
      €316 €91
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Fri, Nov 6 | SKY express
      €91
      71% off
      €316 €91
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Tue, Nov 3 | SKY express
      €97
      69% off
      €316 €97
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Wed, Nov 25 | SKY express
      €101
      68% off
      €316 €101
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Fri, Jan 8 | SKY express
      €102
      68% off
      €316 €102
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Sun, Jan 3 | SKY express
      €106
      66% off
      €316 €106
    • HER 18:50
      2h 20m
      1 stop
      JTR 21:10
      Heraklion - Santorini | Sun, Dec 20 | SKY express
      €110
      65% off
      €316 €110
    • HER 13:00
      17h 25m
      1 stop
      JTR 14:00
      Heraklion - Santorini | Wed, Oct 28 | Normal Airline
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Displayed flight fares from Heraklion to Santorini are based on average prices across airlines for the next 3 months, according to the latest Trip.com database.

Which airline offers the cheapest flights from Heraklion International Airport to Santorini Airport?

The cheapest airline flying from Heraklion International Airport to Santorini Airport is AEGEAN (from €51) among 4 carriers operating this route. Based on Trip.com's latest 7-day flight data.

AEGEAN
From €51
SKY express
From €58
easyJet
From €96
Hahn Air
From €203

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What is the flight schedule from Heraklion International Airport to Santorini Airport?

Check the schedule for flights from Heraklion to Santorini and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. GQ215

    Heraklion International Airport

    18:50

    HER

    50m

    Direct

    19:40

    ATH

    S M T W T F S
    Search

  2. GQ346

    Athens International Airport "Eleftherios Venizelos"

    20:15

    ATH

    45m

    Direct

    21:00

    JTR

    S M T W T F S

  3. A3301

    Heraklion International Airport

    06:00

    HER

    49m

    Direct

    06:49

    ATH

    S M T W T F S
    Search

  4. A3354

    Athens International Airport "Eleftherios Venizelos"

    09:55

    ATH

    50m

    Direct

    10:45

    JTR

    S M T W T F S

  5. A3323

    Heraklion International Airport

    17:05

    HER

    55m

    Direct

    18:00

    ATH

    S M T W T F S
    Search

  6. A3364

    Athens International Airport "Eleftherios Venizelos"

    22:00

    ATH

    45m

    Direct

    22:45

    JTR

    S M T W T F S

  7. A3315

    Heraklion International Airport

    15:05

    HER

    1h 2m

    Direct

    16:07

    ATH

    S M T W T F S
    Search

  8. A3364

    Athens International Airport "Eleftherios Venizelos"

    22:00

    ATH

    45m

    Direct

    22:45

    JTR

    S M T W T F S

  9. A3301

    Heraklion International Airport

    06:00

    HER

    49m

    Direct

    06:49

    ATH

    S M T W T F S
    Search

  10. A3366

    Athens International Airport "Eleftherios Venizelos"

    13:51

    ATH

    43m

    Direct

    14:34

    JTR

    S M T W T F S

  11. A3321

    Heraklion International Airport

    21:50

    HER

    50m

    Direct

    22:40

    ATH

    S M T W T F S
    Search

  12. A3352

    Athens International Airport "Eleftherios Venizelos"

    06:50

    ATH

    45m

    Direct

    07:35

    JTR

    S M T W T F S

  13. GQ217

    Heraklion International Airport

    21:45

    HER

    50m

    Direct

    22:35

    ATH

    S M T W - F S
    Search

  14. GQ340

    Athens International Airport "Eleftherios Venizelos"

    07:40

    ATH

    45m

    Direct

    08:25

    JTR

    S M T W T F S

  15. A3319

    Heraklion International Airport

    18:25

    HER

    50m

    Direct

    19:15

    ATH

    S M T W T F S
    Search

  16. A3352

    Athens International Airport "Eleftherios Venizelos"

    06:50

    ATH

    45m

    Direct

    07:35

    JTR

    S M T W T F S

  17. A3321

    Heraklion International Airport

    21:50

    HER

    50m

    Direct

    22:40

    ATH

    S M T W T F S
    Search

  18. A3354

    Athens International Airport "Eleftherios Venizelos"

    09:55

    ATH

    50m

    Direct

    10:45

    JTR

    S M T W T F S

  19. GQ215

    Heraklion International Airport

    18:50

    HER

    50m

    Direct

    19:40

    ATH

    S M T W T F S
    Search

  20. GQ340

    Athens International Airport "Eleftherios Venizelos"

    07:40

    ATH

    45m

    Direct

    08:25

    JTR

    S M T W T F S
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About Heraklion International Airport and Santorini Airport

Learn about Heraklion International Airport (HER) and Santorini Airport (JTR) — including location, terminals, transportation, and travel tips.

Flight distance 121.93km
Cheapest one-way ticket price €51
Cheapest return ticket price €122

FAQs for Heraklion International Airport to Santorini Airport Flights

  • How many daily flights are there from Heraklion International Airport (HER) to Santorini Airport (JTR)?

    There are around 1 daily flights from Heraklion International Airport (HER) to Santorini Airport (JTR).
  • The earliest flight from Heraklion International Airport to Santorini Airport departs at 16:55, and the last departs at 16:55, with about 1 flights per day. Flight times may change, so please check the latest departure and arrival times before you travel.
  • The route from Heraklion International Airport (HER) to Santorini Airport (JTR) is quite popular. Without considering departure times or holidays, tickets cost around €171 in October, the most expensive month to book this route.
  • One-way flights from Heraklion International Airport to Santorini Airport currently start from €51, and round-trip fares start from €122. The current lowest fare is a AEGEAN flight departing on Wed, Nov 4; prices may vary depending on availability.
  • Yes. Trade Air Ltd. operate direct flights from Heraklion International Airport to Santorini Airport, with an average flight time of 21 minutes, and around 1 weekly flights. Actual flight frequency may vary by season.
  • Based on Trip.com flight data for departures within the next 30 days with at most one stop, the average one-way price from Heraklion International Airport to Santorini Airport is €107. Prices may vary depending on the departure date, airline, and availability.
  • Heraklion International Airport to Santorini Airport operates around 1 weekly flights, mainly by Trade Air Ltd.. Actual frequency may vary during holidays and seasonal schedule adjustments.
  • Enter Heraklion International Airport and Santorini Airport, select your departure date and number of passengers, then compare flights by price, flight duration, and baggage allowance. Once you've chosen a fare, review the change and refund rules, fill in passenger details, and pay to receive your booking confirmation.

Find Cheap Flights with Trip.com

Note: Prices shown on this page are the estimated lowest prices and include all taxes and fees found in the last 24 hours.

Book with no extra fees

Prices displayed on this page are all-inclusive (including taxes, fuel surcharges, civil aviation development fund, etc.), with all fees confirmed before payment. Fees for luggage, meals, Wi-Fi, or other additional services are also included as shown in the flight cards.

Real-time pricing updates

Prices, availability, and travel information on this page have been updated within the last 24 hours—sometimes even in real time. The more popular the route, the more accurate the data.

Change & Cancellation Policy

Trip.com shows the cancellation and change policies for each flight ticket during the booking process, including any fees and applicable conditions. Please check the following scenarios:
Voluntary cancellation/change:
To request a change or cancellation, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and flight segment, and submit your request. Please note that additional charges may apply according to the airline's ticket policy.
Cancellation/change due to a flight schedule change:
If the flight schedule has changed and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For more details about change and cancellation policies, please visit the customer support pages.