Trip.com
>
Cheap Flights
>
Malaysia
>
Kota Kinabalu
>
Manila to Kota Kinabalu flight
>
Ninoy Aquino International Airport to Kota Kinabalu International Airport flight

Explore the cheapest one-way and round-trip flights from Ninoy Aquino International Airport to Kota Kinabalu International Airport over the next 90 days, with one-way fares from US$74 and round-trip from US$153. Based on Trip.com's latest 7-day flight data.

    • Cheapest nonstop
      MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 19 | Philippines AirAsia
      BKI 19:05
      2h 10m
      Direct
      MNL 21:15
      Kota Kinabalu - Manila | Tue, Nov 24 | Philippines AirAsia
      US$153 US$199
      23% off
      23% off
      US$199 US$153
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Fri, Nov 20 | Philippines AirAsia
      BKI 19:05
      2h 10m
      Direct
      MNL 21:15
      Kota Kinabalu - Manila | Thu, Nov 26 | Philippines AirAsia
      US$153 US$199
      23% off
      23% off
      US$199 US$153
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 15 | Philippines AirAsia
      BKI 19:05
      2h 10m
      Direct
      MNL 21:15
      Kota Kinabalu - Manila | Fri, Nov 20 | Philippines AirAsia
      US$153 US$199
      23% off
      23% off
      US$199 US$153
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Tue, Nov 17 | Philippines AirAsia
      BKI 19:05
      2h 10m
      Direct
      MNL 21:15
      Kota Kinabalu - Manila | Fri, Nov 20 | Philippines AirAsia
      US$153
      23% off
      US$199 US$153
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 12 | Philippines AirAsia
      BKI 19:05
      2h 10m
      Direct
      MNL 21:15
      Kota Kinabalu - Manila | Sun, Nov 15 | Philippines AirAsia
      US$153
      23% off
      US$199 US$153
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Tue, Nov 10 | Philippines AirAsia
      BKI 19:05
      2h 10m
      Direct
      MNL 21:15
      Kota Kinabalu - Manila | Sun, Nov 15 | Philippines AirAsia
      US$155
      22% off
      US$199 US$155
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 26 | Philippines AirAsia
      BKI 19:05
      2h 10m
      Direct
      MNL 21:15
      Kota Kinabalu - Manila | Sun, Nov 29 | Philippines AirAsia
      US$155
      22% off
      US$199 US$155
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Fri, Nov 27 | Philippines AirAsia
      BKI 19:05
      2h 10m
      Direct
      MNL 21:15
      Kota Kinabalu - Manila | Tue, Dec 1 | Philippines AirAsia
      US$155
      22% off
      US$199 US$155
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 22 | Philippines AirAsia
      BKI 19:05
      2h 10m
      Direct
      MNL 21:15
      Kota Kinabalu - Manila | Thu, Nov 26 | Philippines AirAsia
      US$155
      22% off
      US$199 US$155
    • MNL 13:00
      17h 25m
      1 stop
      BKI 14:00
      Manila - Kota Kinabalu | Thu, Oct 29 | Normal Airline
      BKI 15:00
      6h
      Direct
      MNL 16:00
      Kota Kinabalu - Manila | Sat, Oct 31 | Normal Airline
      Find more flights
      Find more flights
    • Cheapest
      MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 8 | Philippines AirAsia
      US$74 US$98
      24% off
      24% off
      US$98 US$74
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 26 | Philippines AirAsia
      US$77 US$98
      21% off
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 19 | Philippines AirAsia
      US$77 US$98
      21% off
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 15 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Dec 10 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Fri, Nov 27 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Tue, Dec 8 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 12 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 29 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 13:00
      17h 25m
      1 stop
      BKI 14:00
      Manila - Kota Kinabalu | Thu, Oct 29 | Normal Airline
      Find more flights
      Find more flights
    • Cheapest nonstop
      MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 8 | Philippines AirAsia
      US$74 US$98
      24% off
      24% off
      US$98 US$74
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 26 | Philippines AirAsia
      US$77 US$98
      21% off
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 19 | Philippines AirAsia
      US$77 US$98
      21% off
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 15 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Dec 10 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Fri, Nov 27 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Tue, Dec 8 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 12 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 29 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 13:00
      17h 25m
      1 stop
      BKI 14:00
      Manila - Kota Kinabalu | Thu, Oct 29 | Normal Airline
      Find more flights
      Find more flights
    • Cheapest nonstop
      MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Mon, Nov 16 | Philippines AirAsia
      US$77 US$319
      76% off
      76% off
      US$319 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Mon, Nov 30 | Philippines AirAsia
      US$77 US$319
      76% off
      76% off
      US$319 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 8 | Philippines AirAsia
      US$77 US$319
      76% off
      76% off
      US$319 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Wed, Nov 11 | Philippines AirAsia
      US$77
      76% off
      US$319 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Dec 6 | Philippines AirAsia
      US$77
      76% off
      US$319 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Wed, Nov 25 | Philippines AirAsia
      US$78
      76% off
      US$319 US$78
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Mon, Jan 18 | Philippines AirAsia
      US$78
      76% off
      US$319 US$78
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Wed, Jan 13 | Philippines AirAsia
      US$78
      76% off
      US$319 US$78
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Fri, Dec 4 | Philippines AirAsia
      US$78
      76% off
      US$319 US$78
    • MNL 13:00
      17h 25m
      1 stop
      BKI 14:00
      Manila - Kota Kinabalu | Thu, Oct 29 | Normal Airline
      Find more flights
      Find more flights
    • Cheapest nonstop
      MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Mon, Nov 2 | Philippines AirAsia
      US$79 US$375
      79% off
      79% off
      US$375 US$79
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 1 | Philippines AirAsia
      US$82 US$375
      78% off
      78% off
      US$375 US$82
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Wed, Oct 28 | Philippines AirAsia
      US$96 US$375
      74% off
      74% off
      US$375 US$96
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Fri, Oct 30 | Philippines AirAsia
      US$102
      73% off
      US$375 US$102
    • MNL 15:00
      5h 10m
      1 stop
      BKI 20:10
      Manila - Kota Kinabalu | Sun, Nov 1 | Royal Brunei Airlines
      US$186
      50% off
      US$375 US$186
    • MNL 15:00
      4h 5m
      1 stop
      BKI 19:05
      Manila - Kota Kinabalu | Sat, Oct 31 | Royal Brunei Airlines
      US$195
      48% off
      US$375 US$195
    • MNL 17:50
      6h 45m
      1 stop
      BKI 00:35
      Manila - Kota Kinabalu | Sun, Nov 1 | Cathay Pacific
      US$250
      33% off
      US$375 US$250
    • MNL 23:05
      9h 45m
      1 stop
      BKI 08:50
      Manila - Kota Kinabalu | Wed, Oct 28 | AirAsia
      US$300
      20% off
      US$375 US$300
    • MNL 13:00
      17h 25m
      1 stop
      BKI 14:00
      Manila - Kota Kinabalu | Thu, Oct 29 | Normal Airline
      Find more flights
      Find more flights
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 8 | Philippines AirAsia
      US$74 US$98
      24% off
      24% off
      US$98 US$74
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 26 | Philippines AirAsia
      US$77 US$98
      21% off
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 19 | Philippines AirAsia
      US$77 US$98
      21% off
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 15 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Dec 10 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Fri, Nov 27 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Tue, Dec 8 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Thu, Nov 12 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 16:15
      2h 5m
      Direct
      BKI 18:20
      Manila - Kota Kinabalu | Sun, Nov 29 | Philippines AirAsia
      US$77
      21% off
      US$98 US$77
    • MNL 13:00
      17h 25m
      1 stop
      BKI 14:00
      Manila - Kota Kinabalu | Thu, Oct 29 | Normal Airline
      Find more flights
      Find more flights

Displayed flight fares from Manila to Kota Kinabalu are based on average prices across airlines for the next 3 months, according to the latest Trip.com database.

Trip.com Price Insights: Flights from Ninoy Aquino International Airport to Kota Kinabalu International Airport

What is the cheapest month to fly from Ninoy Aquino International Airport to Kota Kinabalu International Airport?

The data is based on the past 12 months and shows the average one-way ticket prices from Ninoy Aquino International Airport to Kota Kinabalu International Airport for each month in the Trip.com database.

Based on Trip.com's data from the past 12 months, the cheapest one-way flights from Ninoy Aquino International Airport to Kota Kinabalu International Airport are usually in November, with an average price of US$59. It is best to avoid September, when the average price can reach US$98.

US$98
US$79
US$59
US$40
    Cheapest
  • US$70
    Oct
  • US$59
    Nov
  • US$90
    Dec
  • US$88
    Jan
  • US$80
    Feb
  • US$72
    Mar
  • US$71
    Apr
  • US$91
    May
  • US$95
    Jun
  • US$91
    Jul
  • US$89
    Aug
  • US$98
    Sep

What is the cheapest month to fly return from Ninoy Aquino International Airport to Kota Kinabalu International Airport?

The data is based on the past 12 months and shows the average monthly return fares from Ninoy Aquino International Airport to Kota Kinabalu International Airport in the Trip.com database.

Based on Trip.com's data from the past 12 months, January is often the month to find the lowest fares from Ninoy Aquino International Airport to Kota Kinabalu International Airport, with an average price of US$138. September is usually the most expensive month, with an average price reaching US$203.

US$203
US$171
US$138
US$106
    Cheapest
  • US$161
    Oct
  • US$151
    Nov
  • US$168
    Dec
  • US$138
    Jan
  • US$156
    Feb
  • US$143
    Mar
  • US$140
    Apr
  • US$199
    May
  • US$200
    Jun
  • US$155
    Jul
  • US$184
    Aug
  • US$203
    Sep

What is the cheapest day of the week to fly from Ninoy Aquino International Airport to Kota Kinabalu International Airport?

The data is based on the past 12 months and shows the average ticket prices from Ninoy Aquino International Airport to Kota Kinabalu International Airport for each day of the week in the Trip.com database.

Based on Trip.com's data from the past 12 months, the cheapest departure day from Ninoy Aquino International Airport to Kota Kinabalu International Airport is Monday, with average prices usually lower than other days. Avoid departing on Thursday as prices are typically highest on that day.

US$164
US$121
US$78
US$35
  • US$78
    Mon
  • US$133
    Tue
  • US$84
    Wed
  • US$164
    Thu
  • US$82
    Fri
  • US$119
    Sat
  • US$81
    Sun

Which airline offers the cheapest flights from Ninoy Aquino International Airport to Kota Kinabalu International Airport?

The cheapest airline flying from Ninoy Aquino International Airport to Kota Kinabalu International Airport is Philippines AirAsia (from US$74) among 10 carriers operating this route. Based on Trip.com's latest 7-day flight data.

Philippines AirAsia
From US$74
Scoot
From US$102
AirAsia
From US$143
Cebu Pacific
From US$147
HK Express
From US$150
Royal Brunei Airlines
From US$156
Malaysia Airlines
From US$182
Philippine Airlines
From US$191
Singapore Airlines
From US$207
China Southern Airlines
From US$223

Find more flights and airlines

What is the flight schedule from Ninoy Aquino International Airport to Kota Kinabalu International Airport?

Check the schedule for flights from Manila to Kota Kinabalu and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. Z2501

    Ninoy Aquino International Airport

    22:55

    MNL

    2h 10m

    01:05

    BKI

    S - T - T - S
    Search
Find more flights and airlines

About Ninoy Aquino International Airport and Kota Kinabalu International Airport

Learn about Ninoy Aquino International Airport (MNL) and Kota Kinabalu International Airport (BKI) — including location, terminals, transportation, and travel tips.

Flight distance 1,099.76km
Cheapest one-way ticket price US$74
Cheapest return ticket price US$153

FAQs for Ninoy Aquino International Airport to Kota Kinabalu International Airport Flights

  • How many daily flights are there from Ninoy Aquino International Airport (MNL) to Kota Kinabalu International Airport (BKI)?

    There are around 1 daily flights from Ninoy Aquino International Airport (MNL) to Kota Kinabalu International Airport (BKI).
  • The earliest flight from Ninoy Aquino International Airport to Kota Kinabalu International Airport departs at 23:10, and the last departs at 23:10, with about 1 flights per day. Flight times may change, so please check the latest departure and arrival times before you travel.
  • The route from Ninoy Aquino International Airport (MNL) to Kota Kinabalu International Airport (BKI) is quite popular. Without considering departure times or holidays, tickets cost around US$107 in November, the most expensive month to book this route.
    • The distance from Kota Kinabalu International Airport to downtown is about 7km, by taxi about 20 minutes.
  • Philippines AirAsia is a very popular airline operating an average of 597 flights per month.
  • One-way flights from Ninoy Aquino International Airport to Kota Kinabalu International Airport currently start from US$74, and round-trip fares start from US$153. The current lowest fare is a Philippines AirAsia flight departing on Sun, Nov 8; prices may vary depending on availability.
  • Yes. Philippines AirAsia operate direct flights from Ninoy Aquino International Airport to Kota Kinabalu International Airport, with an average flight time of 1 hour 34 minutes, and around 4 weekly flights. Actual flight frequency may vary by season.
  • Based on Trip.com flight data for departures within the next 30 days with at most one stop, the average one-way price from Ninoy Aquino International Airport to Kota Kinabalu International Airport is US$237. Prices may vary depending on the departure date, airline, and availability.
  • Philippines AirAsia are the most popular budget airlines flying from Ninoy Aquino International Airport to Kota Kinabalu International Airport, with one-way fares starting from US$74. Compare final prices carefully, as baggage, seat selection and payment fees may apply.
  • Ninoy Aquino International Airport to Kota Kinabalu International Airport operates around 4 weekly flights, mainly by Philippines AirAsia. Actual frequency may vary during holidays and seasonal schedule adjustments.
  • Enter Ninoy Aquino International Airport and Kota Kinabalu International Airport, select your departure date and number of passengers, then compare flights by price, flight duration, and baggage allowance. Once you've chosen a fare, review the change and refund rules, fill in passenger details, and pay to receive your booking confirmation.

Find Cheap Flights with Trip.com

Note: Prices shown on this page are the estimated lowest prices and include all taxes and fees found in the last 24 hours.

Book with no extra fees

Prices displayed on this page are all-inclusive (including taxes, fuel surcharges, civil aviation development fund, etc.), with all fees confirmed before payment. Fees for luggage, meals, Wi-Fi, or other additional services are also included as shown in the flight cards.

Real-time pricing updates

Prices, availability, and travel information on this page have been updated within the last 24 hours—sometimes even in real time. The more popular the route, the more accurate the data.

Change & Cancellation Policy

Trip.com shows the cancellation and change policies for each flight ticket during the booking process, including any fees and applicable conditions. Please check the following scenarios:
Voluntary cancellation/change:
To request a change or cancellation, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and flight segment, and submit your request. Please note that additional charges may apply according to the airline's ticket policy.
Cancellation/change due to a flight schedule change:
If the flight schedule has changed and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For more details about change and cancellation policies, please visit the customer support pages.