Boutique Hotels in Marathon
Select your dates to find the best Marathon Boutique hotel deals
Scroll down to see hotels
Filter by:
Hotel Star Rating
≤2345
Guest Rating
Amazing 9+Great 8+Good 7+Pleasant 6+Top Boutique Hotels in Marathon
Check out our pick of great boutique hotels for your travel
Most Booked
Lowest price
Closest to downtown
Highest Rated
99+
Hotels in Marathon
Featured facilities: Swimming Pool, Bar, Restaurant
Very Good
118 reviews
8.5/10
1 night
From BRL 893
99+
Very Good
103 reviews
8.7/10
1 night
From BRL 1,191
99+
Hotels in Marathon
Featured facilities: Swimming Pool, Bar, Restaurant
Very Good
109 reviews
8.7/10
1 night
From BRL 865
44
Hotel near Key Colony,Marathon
Featured facilities: Swimming Pool
Outstanding
10/10
18
Hotels in Marathon
Featured facilities: Swimming Pool
Outstanding
5 reviews
10/10
36
Hotels in Marathon
Featured facilities: Private Swimming Pool
Outstanding
19 reviews
10/10
41
Hotels in Marathon
Featured facilities: Swimming Pool
Outstanding
12 reviews
9.8/10
26
Hotels in Marathon
Featured facilities: Swimming Pool
Outstanding
10/10
47
Hotels in Marathon
Featured facilities: Swimming Pool
Amazing
9.6/10
Frequently Asked Questions
What are the best places to stay in Marathon?
Some of the best places to stay in Marathon are near popular attractions like Crane Point Hammock, Turtle Hospital and Turtle Hospital, offering easy access to key sights and amenities.
What are the top hotels in Marathon near Crane Point Hammock?
Some of the top hotels in Marathon near Crane Point Hammock include Tropical Cottages (from BRL 497), Yacht Haven (from BRL 1,376) and Kingsail Resort (from BRL 541), all offering easy access to Crane Point Hammock, making them ideal for visitors looking to explore the area.
How to get good deals on hotels in Marathon?
To get the best hotel deals, try these Trip.com tips:
1. Log In Trip.com first and unlock member-only rates and Trip Coins (loyalty points).
2. Book Midweek: Sun–Thurs stays are much cheaper than weekends.
3. Set Price Alerts: Monitor price drops and rebook if needed.
4. Use “We Price Match” Policy: If you find a lower price elsewhere, Trip.com will refund the difference.
5. Avoid major holidays, conventions, and big events.
6. Check the Deals Page to see what promotions are available now on Trip.com.
Keep Exploring
Accommodation types
Beach Hotels in MarathonHotels with Bars in MarathonHomestays in Marathon4-Star Hotels in MarathonHotels with Pools in MarathonHotels with Breakfast in MarathonSea View Hotels in MarathonPet-friendly Hotels in MarathonFamily Hotels in Marathon Holiday Villas in MarathonHotels with Parking in MarathonBoutique Hotels in MarathonHotels with Balcony in MarathonHotels with Gym in MarathonHotels with Bathtub in Marathon
Hotels near attractions
Popular Hotels
Keyz Style 3Br/3B Heated Pool, 50' ft Dock w/ Deep Access to Atlantic and GulfCaptain Pip's Marina & Hideaway~Book Now~April-Mid May 2026~650/NT~ Fish, Swim, Relax! Pool & Dock–Near BeachAqua Lodges at Coconut Cay RV and MarinaFisherman Paradise, Dock, Pool , Ice Machine, Jacuzzi.Beach House, Waterfront, Sombrero Beach, Florida Keys Rental, Private Pool, DockFairfield Inn & Suites Marathon Florida KeysWaterfront 2BR w/ Dock, Hot Tub & Easy Ocean Access – Boaters Welcome!Tranquility Bay ResortStunning BRIGHT Direct Waterfront 5/4 Home! Private Pool, Hot Tub & Dock!BeachHouse @ Sombrero & Ocean access w/45’ Dock, kayaks and Bikes.Pool Spa Canal Dock! Check Out Last Minute Deal 7+Nights May 4-22Waterfront, oceanview renovated pvt. 3 bedroom, 3.5 bath with pool and dockage.Courtyard Faro Blanco ResortFaro Blanco Resort Marathon Florida Keys, Curio by Hilton